Transcript: lnc-SIPA1L2-1:8

Basic information

LNCipedia transcript ID: lnc-SIPA1L2-1:8 
LNCipedia gene ID: lnc-SIPA1L2-1
Location (hg38): chr1:232984135-232985884
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 598 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT010246
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 422.3483 coding 
CPAT coding probability 26.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SIPA1L2-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCNXL2-1:1
4.0 lnc-PCNXL2-1:1
4.1 lnc-PCNXL2-1:1
5.0 lnc-PCNXL2-1:1
5.1 lnc-SIPA1L2-1:6
5.2 lnc-SIPA1L2-1:8