Transcript: lnc-SIRT5-3:1

Basic information

LNCipedia transcript ID: lnc-SIRT5-3:1 
LNCipedia gene ID: lnc-SIRT5-3
Location (hg38): chr6:13436572-13437837
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 440 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3117_chr6:13436803-13438069_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.6431 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIRT5-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIRT5-3:1
4.0 lnc-SIRT5-3:1
4.1 lnc-SIRT5-3:1
5.0 lnc-SIRT5-3:1
5.1 lnc-PRPF4B-144:1
5.2 lnc-SIRT5-3:1