Transcript: lnc-SLC12A7-4:10

Basic information

LNCipedia transcript ID: lnc-SLC12A7-4:10 
LNCipedia gene ID: lnc-SLC12A7-4
Location (hg38): chr5:990329-997319
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 278 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000215246.4|FTMT21700018582.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -38.2434 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC12A7-4:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC12A7-4:10
5.0 lnc-SLC12A7-4:10
5.1 lnc-IRX2-29:6
5.2 lnc-SLC12A7-4:10