Transcript: lnc-SLC12A7-4:8

Basic information

LNCipedia transcript ID: lnc-SLC12A7-4:8 
LNCipedia gene ID: lnc-SLC12A7-4
Location (hg38): chr5:986822-997319
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3785 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000215246.4|ENCT00000354259.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.6639 non-coding 
CPAT coding probability 4.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC12A7-4:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC12A7-4:8
5.0 lnc-SLC12A7-4:8
5.1 lnc-IRX2-29:4
5.2 lnc-SLC12A7-4:8