Transcript: lnc-SLC16A11-7:1

Basic information

LNCipedia transcript ID: lnc-SLC16A11-7:1 
LNCipedia gene ID: lnc-SLC16A11-7
Location (hg38): chr17:7018149-7019879
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 212 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026027; NONHSAT145327
Alternative gene names: XLOC_012373; linc-TEKT1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 7.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC16A11-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC027763.2.1-1:1
3.1 lnc-AC027763.2.1-1:1
4.0 lnc-AC027763.2.1-1:1
4.1 lnc-AC027763.2.1-1:1
5.0 lnc-AC027763.2.1-1:1
5.1 lnc-PHF23-13:1
5.2 lnc-SLC16A11-7:1