Transcript: lnc-SLC16A11-7:19

Basic information

LNCipedia transcript ID: lnc-SLC16A11-7:19 
LNCipedia gene ID: lnc-SLC16A11-7
RefSeq ID: NR_040089
Location (hg38): chr17:6985123-7012334
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 651 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_040089; NR_040089.1
Alternative gene names: ALOX12-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.3815 non-coding 
CPAT coding probability 8.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC16A11-7:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC027763.2.1-1:7
4.0 lnc-AC027763.2.1-1:7
4.1 lnc-AC027763.2.1-1:7
5.0 lnc-AC027763.2.1-1:7
5.1 lnc-PHF23-13:19
5.2 lnc-SLC16A11-7:19