Transcript: lnc-SLC16A11-7:24

Basic information

LNCipedia transcript ID: lnc-SLC16A11-7:24 
LNCipedia gene ID: lnc-SLC16A11-7
Location (hg38): chr17:6875234-6881116
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1801 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025543; NONHSAT145300
Alternative gene names: XLOC_012370; linc-TEKT1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8145 non-coding 
CPAT coding probability 39.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC16A11-7:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TEKT1-1:1
3.1 lnc-TEKT1-1:1
4.0 lnc-AC027763.2.1-1:17
4.1 lnc-AC027763.2.1-1:17
5.0 lnc-AC027763.2.1-1:17
5.1 lnc-PHF23-13:24
5.2 lnc-SLC16A11-7:24