Transcript: lnc-SLC16A11-7:3

Basic information

LNCipedia transcript ID: lnc-SLC16A11-7:3 
HGNC Gene Symbol: lnc-SLC16A11-7    
HGNC Full Gene Name: mir-497-195 cluster host gene
Ensembl Gene ID: ENSG00000267532
Ensembl Transcript ID: ENST00000572453
Location (hg38): chr17:7015822-7019659
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3838 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT145321; ENST00000572453.1
Alternative gene names: ENSG00000267532.2; MIR497HG; ENSG00000267532.3; ENSG00000267532.4; ENSG00000267532.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.8326 non-coding 
CPAT coding probability 44.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC16A11-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC027763.2.1-1:2
4.0 lnc-AC027763.2.1-1:2
4.1 lnc-AC027763.2.1-1:2
5.0 lnc-AC027763.2.1-1:2
5.1 lnc-PHF23-13:3
5.2 lnc-SLC16A11-7:3