Transcript: lnc-SLC1A1-1:4

Basic information

LNCipedia transcript ID: lnc-SLC1A1-1:4 
LNCipedia gene ID: lnc-SLC1A1-1
Location (hg38): chr9:4298101-4307267
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3335 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228322.1|MICT00000355125.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -17.7733 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC1A1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC1A1-1:4
5.0 lnc-SLC1A1-1:4
5.1 lnc-RECK-278:3
5.2 lnc-SLC1A1-1:4