Transcript: lnc-SLC22A31-7:4

Basic information

LNCipedia transcript ID: lnc-SLC22A31-7:4 
LNCipedia gene ID: lnc-SLC22A31-7
Location (hg38): chr16:89300766-89339970
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 580 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT144517
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 262.6974 coding 
CPAT coding probability 60.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC22A31-7:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBFA2T3-4:5
4.0 lnc-CHMP1A-4:4
4.1 lnc-CHMP1A-4:4
5.0 lnc-CHMP1A-4:4
5.1 lnc-KLHDC4-52:4
5.2 lnc-SLC22A31-7:4