Transcript: lnc-SLC22A31-7:5

Basic information

LNCipedia transcript ID: lnc-SLC22A31-7:5 
LNCipedia gene ID: lnc-SLC22A31-7
Location (hg38): chr16:89298876-89320356
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2750 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT144515
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 262.6974 coding 
CPAT coding probability 99.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC22A31-7:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBFA2T3-4:6
4.0 lnc-CHMP1A-4:5
4.1 lnc-CHMP1A-4:5
5.0 lnc-CHMP1A-4:5
5.1 lnc-KLHDC4-52:5
5.2 lnc-SLC22A31-7:5