Transcript: lnc-SLC25A13-1:1

Basic information

LNCipedia transcript ID: lnc-SLC25A13-1:1 
LNCipedia gene ID: lnc-SLC25A13-1
Location (hg38): chr7:96622006-96664338
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1228 bp
Exons: 5
Sources: Broad Institute; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00012918; ENST00000606019.1
Alternative gene names: XLOC_006529; linc-SLC25A13; ENSG00000272377.1; RP11-682N22.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.2262 non-coding 
CPAT coding probability 3.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A13-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC092031.1-1:1
3.1 lnc-AC092031.1-1:1
4.0 lnc-AC092031.1-1:1
4.1 lnc-AC092031.1-1:1
5.0 lnc-AC092031.1-1:1
5.1 lnc-CYP3A5-28:1
5.2 lnc-SLC25A13-1:1