Transcript: lnc-SLC25A27-2:6

Basic information

LNCipedia transcript ID: lnc-SLC25A27-2:6 
LNCipedia gene ID: lnc-SLC25A27-2
RefSeq ID: NR_125837
Location (hg38): chr6:46492052-46533486
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1350 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125837.1
Alternative gene names: LOC101926898


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.4305 non-coding 
CPAT coding probability 15.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A27-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TREML4-99:6
5.1 lnc-TREML4-99:6
5.2 lnc-SLC25A27-2:6