Transcript: lnc-SLC25A32-3:12

Basic information

LNCipedia transcript ID: lnc-SLC25A32-3:12 
LNCipedia gene ID: lnc-SLC25A32-3
Location (hg38): chr8:103480958-103501907
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3419 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253477.1|MICT00000349045.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.3006 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A32-3:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC25A32-3:12
5.0 lnc-SLC25A32-3:12
5.1 lnc-ZNF706-80:3
5.2 lnc-SLC25A32-3:12