Transcript: lnc-SLC25A52-4:1

Basic information

LNCipedia transcript ID: lnc-SLC25A52-4:1 
LNCipedia gene ID: lnc-SLC25A52-4
Ensembl Gene ID: ENSG00000276282
Ensembl Transcript ID: ENST00000616300
Location (hg38): chr18:31895745-31896410
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 666 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616300.1
Alternative gene names: ENSG00000276282.1; RP11-210K20.5; AC022960.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.647 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC25A52-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MCART2-4:1
4.1 lnc-MCART2-4:1
5.0 lnc-MCART2-4:1
5.1 lnc-SMAD2-123:1
5.2 lnc-SLC25A52-4:1