Transcript: lnc-SLC2A10-9:3

Basic information

LNCipedia transcript ID: lnc-SLC2A10-9:3 
LNCipedia gene ID: lnc-SLC2A10-9
Location (hg38): chr20:46406787-46455687
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 12316 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000053385.1|MICT00000218819.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 33.8621 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC2A10-9:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC2A10-9:3
5.0 lnc-SLC2A10-9:3
5.1 lnc-STK4-43:1
5.2 lnc-SLC2A10-9:3