Transcript: lnc-SLC2A2-2:1

Basic information

LNCipedia transcript ID: lnc-SLC2A2-2:1 
LNCipedia gene ID: lnc-SLC2A2-2
Location (hg38): chr3:170958857-170959203
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 347 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: uc_136_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.8317 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC2A2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC2A2-2:1
4.0 lnc-SLC2A2-2:1
4.1 lnc-SLC2A2-2:1
5.0 lnc-SLC2A2-2:1
5.1 lnc-TBL1XR1-43:1
5.2 lnc-SLC2A2-2:1