Transcript: lnc-SLC30A7-2:11

Basic information

LNCipedia transcript ID: lnc-SLC30A7-2:11 
LNCipedia gene ID: lnc-SLC30A7-2
Location (hg38): chr1:101025872-101026767
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 896 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT004819
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -273.3426 non-coding 
CPAT coding probability 1.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC30A7-2:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC30A7-2:11
4.0 lnc-SLC30A7-2:11
4.1 lnc-SLC30A7-2:11
5.0 lnc-SLC30A7-2:11
5.1 lnc-SLC30A7-2:11
5.2 lnc-SLC30A7-2:11