Transcript: lnc-SLC35F5-3:10

Basic information

LNCipedia transcript ID: lnc-SLC35F5-3:10 
LNCipedia gene ID: lnc-SLC35F5-3
Location (hg38): chr2:113872935-113890954
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2938 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270019.1|ENCT00000246734.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.9174 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35F5-3:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC35F5-3:10
5.0 lnc-SLC35F5-3:10
5.1 lnc-EN1-26:6
5.2 lnc-SLC35F5-3:10