Transcript: lnc-SLC35F5-3:16

Basic information

LNCipedia transcript ID: lnc-SLC35F5-3:16 
LNCipedia gene ID: lnc-SLC35F5-3
Ensembl Gene ID: ENSG00000270019
Ensembl Transcript ID: ENST00000602760
Location (hg38): chr2:113888203-113889750
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1548 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT073848; ENST00000602760.1
Alternative gene names: ENSG00000270019.1; RP11-141B14.1; AC110769.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.087 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35F5-3:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC35F5-18:1
4.0 lnc-SLC35F5-18:1
4.1 lnc-SLC35F5-3:16
5.0 lnc-SLC35F5-3:16
5.1 lnc-EN1-26:12
5.2 lnc-SLC35F5-3:16