Transcript: lnc-SLC35F5-3:5

Basic information

LNCipedia transcript ID: lnc-SLC35F5-3:5 
LNCipedia gene ID: lnc-SLC35F5-3
Location (hg38): chr2:113830852-113861564
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1956 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT073841
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.1541 non-coding 
CPAT coding probability 3.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35F5-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC35F5-3:5
4.0 lnc-SLC35F5-3:5
4.1 lnc-SLC35F5-3:5
5.0 lnc-SLC35F5-3:5
5.1 lnc-EN1-26:18
5.2 lnc-SLC35F5-3:5