Transcript: lnc-SLC35F5-6:2

Basic information

LNCipedia transcript ID: lnc-SLC35F5-6:2 
LNCipedia gene ID: lnc-SLC35F5-6
Location (hg38): chr2:113545481-113578032
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1358 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_1930_chr2:114303057-114317403_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.4339 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35F5-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC016745.1-6:1
4.0 lnc-AC016745.1-6:1
4.1 lnc-AC016745.1-6:1
5.0 lnc-AC016745.1-6:1
5.1 lnc-EN1-36:1
5.2 lnc-SLC35F5-6:2