Transcript: lnc-SLC35G4-4:1

Basic information

LNCipedia transcript ID: lnc-SLC35G4-4:1 
LNCipedia gene ID: lnc-SLC35G4-4
Location (hg38): chr18:11480030-11496983
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4040 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: l_1528_chr18:11480028-11481803_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.9114 non-coding 
CPAT coding probability 3.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC35G4-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC35G4-4:1
4.0 lnc-SLC35G4-4:1
4.1 lnc-SLC35G4-4:1
5.0 lnc-SLC35G4-4:1
5.1 lnc-RIOK3-177:1
5.2 lnc-SLC35G4-4:1