Transcript: lnc-SLC36A4-5:4

Basic information

LNCipedia transcript ID: lnc-SLC36A4-5:4 
LNCipedia gene ID: lnc-SLC36A4-5
Ensembl Gene ID: ENSG00000282916
Ensembl Transcript ID: ENST00000635432
Location (hg38): chr11:92914272-92915604
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 706 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635432.1
Alternative gene names: ENSG00000282916.1; RP11-676F20.4; AP003171.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.9651 non-coding 
CPAT coding probability 14.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC36A4-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SLC36A4-5:4
4.1 lnc-SLC36A4-5:4
5.0 lnc-SLC36A4-5:4
5.1 lnc-NOX4-32:2
5.2 lnc-SLC36A4-5:4