Transcript: lnc-SLC38A11-4:3

Basic information

LNCipedia transcript ID: lnc-SLC38A11-4:3 
LNCipedia gene ID: lnc-SLC38A11-4
Location (hg38): chr2:164738246-164772046
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 507 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT075229
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 203.5748 coding 
CPAT coding probability 2.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC38A11-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GRB14-1:3
4.0 lnc-SLC38A11-4:3
4.1 lnc-SLC38A11-4:3
5.0 lnc-SLC38A11-4:3
5.1 lnc-SCN9A-19:3
5.2 lnc-SLC38A11-4:3