Transcript: lnc-SLC38A3-6:3

Basic information

LNCipedia transcript ID: lnc-SLC38A3-6:3 
LNCipedia gene ID: lnc-SLC38A3-6
Location (hg38): chr3:50239720-50239984
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 265 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT089803
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC38A3-6:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf45-2:2
4.0 lnc-C3orf45-2:2
4.1 lnc-C3orf45-2:2
5.0 lnc-C3orf45-2:2
5.1 lnc-SLC38A3-5:3
5.2 lnc-SLC38A3-6:3