Transcript: lnc-SLC38A8-6:3

Basic information

LNCipedia transcript ID: lnc-SLC38A8-6:3 
LNCipedia gene ID: lnc-SLC38A8-6
Location (hg38): chr16:83383015-83399546
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 380 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT143999
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.5481 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC38A8-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC38A8-6:3
4.0 lnc-SLC38A8-6:3
4.1 lnc-SLC38A8-6:3
5.0 lnc-SLC38A8-6:3
5.1 lnc-MTHFSD-60:1
5.2 lnc-SLC38A8-6:3