Transcript: lnc-SLC39A11-6:1

Basic information

LNCipedia transcript ID: lnc-SLC39A11-6:1 
LNCipedia gene ID: lnc-SLC39A11-6
Location (hg38): chr17:72066587-72069184
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 562 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1491_chr17:70062727-70065325_whiteBloodCell
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.8598 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC39A11-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC39A11-6:1
4.0 lnc-SLC39A11-6:1
4.1 lnc-SLC39A11-6:1
5.0 lnc-SLC39A11-6:1
5.1 lnc-GRB2-55:1
5.2 lnc-SLC39A11-6:1