Transcript: lnc-SLC39A8-1:10

Basic information

LNCipedia transcript ID: lnc-SLC39A8-1:10 
LNCipedia gene ID: lnc-SLC39A8-1
Location (hg38): chr4:102304448-102345437
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 413 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT097580
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -217.6929 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC39A8-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MANBA-1:8
4.0 lnc-SLC39A8-1:10
4.1 lnc-SLC39A8-1:10
5.0 lnc-SLC39A8-1:10
5.1 lnc-SLC9B2-14:9
5.2 lnc-SLC39A8-1:10