Transcript: lnc-SLC47A2-2:5

Basic information

LNCipedia transcript ID: lnc-SLC47A2-2:5 
LNCipedia gene ID: lnc-SLC47A2-2
Location (hg38): chr17:19597932-19647149
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 234 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033186.1|FTMT26500033273.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC47A2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC47A2-2:5
5.0 lnc-SLC47A2-2:5
5.1 lnc-B9D1-14:6
5.2 lnc-SLC47A2-2:5