Transcript: lnc-SLC49A3-1:2

Basic information

LNCipedia transcript ID: lnc-SLC49A3-1:2 
LNCipedia gene ID: lnc-SLC49A3-1
Location (hg38): chr4:722245-724034
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 599 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT094606
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.9838 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC49A3-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MFSD7-1:2
4.0 lnc-MFSD7-1:2
4.1 lnc-MFSD7-1:2
5.0 lnc-MFSD7-1:2
5.1 lnc-PSAPL1-110:2
5.2 lnc-SLC49A3-1:2