Transcript: lnc-SLC4A3-2:10

Basic information

LNCipedia transcript ID: lnc-SLC4A3-2:10 
LNCipedia gene ID: lnc-SLC4A3-2
Location (hg38): chr2:219685327-219792374
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1899 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227308.2|ENCT00000236157.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.2932 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC4A3-2:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC4A3-2:10
5.0 lnc-SLC4A3-2:10
5.1 lnc-MOGAT1-46:4
5.2 lnc-SLC4A3-2:10