Transcript: lnc-SLC4A3-2:11

Basic information

LNCipedia transcript ID: lnc-SLC4A3-2:11 
LNCipedia gene ID: lnc-SLC4A3-2
Location (hg38): chr2:219685327-219793448
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 696 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227308.2|FTMT20700046928.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -196.7033 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC4A3-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC4A3-2:11
5.0 lnc-SLC4A3-2:11
5.1 lnc-MOGAT1-46:6
5.2 lnc-SLC4A3-2:11