Transcript: lnc-SLC4A3-2:12

Basic information

LNCipedia transcript ID: lnc-SLC4A3-2:12 
LNCipedia gene ID: lnc-SLC4A3-2
Location (hg38): chr2:219688484-219738700
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 958 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227308.2|FTMT20700052301.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.3763 non-coding 
CPAT coding probability 1.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC4A3-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC4A3-2:12
5.0 lnc-SLC4A3-2:12
5.1 lnc-MOGAT1-46:10
5.2 lnc-SLC4A3-2:12