Transcript: lnc-SLC4A3-2:13

Basic information

LNCipedia transcript ID: lnc-SLC4A3-2:13 
LNCipedia gene ID: lnc-SLC4A3-2
Location (hg38): chr2:219793354-219794528
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 526 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT077072; FPKM1_group_18348_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.9909 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC4A3-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC4A3-4:2
4.0 lnc-SLC4A3-4:2
4.1 lnc-SLC4A3-2:13
5.0 lnc-SLC4A3-2:13
5.1 lnc-MOGAT1-46:13
5.2 lnc-SLC4A3-2:13