Transcript: lnc-SLC4A3-2:6

Basic information

LNCipedia transcript ID: lnc-SLC4A3-2:6 
LNCipedia gene ID: lnc-SLC4A3-2
Location (hg38): chr2:219685327-219793392
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 416 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227308.2|ENCT00000236158.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -150.2854 non-coding 
CPAT coding probability 2.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC4A3-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC4A3-2:6
5.0 lnc-SLC4A3-2:6
5.1 lnc-MOGAT1-46:5
5.2 lnc-SLC4A3-2:6