Transcript: lnc-SLC6A12-2:4

Basic information

LNCipedia transcript ID: lnc-SLC6A12-2:4 
LNCipedia gene ID: lnc-SLC6A12-2
Location (hg38): chr12:180712-182408
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1697 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000256540.1|HBMT00000321977.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.9301 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC6A12-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SLC6A12-2:4
5.0 lnc-SLC6A12-2:4
5.1 lnc-CHD4-127:6
5.2 lnc-SLC6A12-2:4