Transcript: lnc-SLC7A4-3:2

Basic information

LNCipedia transcript ID: lnc-SLC7A4-3:2 
LNCipedia gene ID: lnc-SLC7A4-3
Location (hg38): chr22:21113523-21121691
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4921 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT083631
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 62.5216 coding 
CPAT coding probability 95.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLC7A4-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POM121L7-1:3
4.0 lnc-POM121L7-1:3
4.1 lnc-POM121L7-1:3
5.0 lnc-POM121L7-1:3
5.1 lnc-SCARF2-22:2
5.2 lnc-SLC7A4-3:2