Transcript: lnc-SLTM-1:2

Basic information

LNCipedia transcript ID: lnc-SLTM-1:2 
LNCipedia gene ID: lnc-SLTM-1
Location (hg38): chr15:58857537-58868377
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 10481 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT044133
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
YTKLSENLRTLRF 100% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score 83.4346 coding 
CPAT coding probability 2.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLTM-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLTM-1:2
4.0 lnc-SLTM-1:2
4.1 lnc-SLTM-1:2
5.0 lnc-SLTM-1:2
5.1 lnc-ICE2-38:1
5.2 lnc-SLTM-1:2