Transcript: lnc-SLX1B-3:10

Basic information

LNCipedia transcript ID: lnc-SLX1B-3:10 
LNCipedia gene ID: lnc-SLX1B-3
Location (hg38): chr16:29113060-29116291
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 247 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA497:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -155.8035 non-coding 
CPAT coding probability 0.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLX1B-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SNX29P2-1:7
4.1 lnc-SNX29P2-1:7
5.0 lnc-SNX29P2-1:7
5.1 lnc-QPRT-14:6
5.2 lnc-SLX1B-3:10