Transcript: lnc-SLX1B-3:13

Basic information

LNCipedia transcript ID: lnc-SLX1B-3:13 
LNCipedia gene ID: lnc-SLX1B-3
Location (hg38): chr16:29139409-29217807
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 718 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT141573
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.2619 non-coding 
CPAT coding probability 37.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SLX1B-3:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNX29P2-1:5
4.0 lnc-SNX29P2-1:5
4.1 lnc-SNX29P2-1:5
5.0 lnc-SNX29P2-1:5
5.1 lnc-QPRT-14:9
5.2 lnc-SLX1B-3:13