Transcript: lnc-SMAD9-5:1

Basic information

LNCipedia transcript ID: lnc-SMAD9-5:1 
LNCipedia gene ID: lnc-SMAD9-5
Location (hg38): chr13:36741878-36742465
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 588 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT033206
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.0634 non-coding 
CPAT coding probability 9.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMAD9-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMAD9-5:1
4.0 lnc-SMAD9-5:1
4.1 lnc-SMAD9-5:1
5.0 lnc-SMAD9-5:1
5.1 lnc-CCDC169-7:1
5.2 lnc-SMAD9-5:1