Transcript: lnc-SMARCC2-9:2

Basic information

LNCipedia transcript ID: lnc-SMARCC2-9:2 
LNCipedia gene ID: lnc-SMARCC2-9
Location (hg38): chr12:56150150-56152442
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 359 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT028776
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.6162 non-coding 
CPAT coding probability 4.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMARCC2-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMARCC2-6:1
4.0 lnc-SMARCC2-6:1
4.1 lnc-SMARCC2-2:6
5.0 lnc-SMARCC2-2:6
5.1 lnc-PMEL-15:2
5.2 lnc-SMARCC2-9:2