Transcript: lnc-SMG6-1:1

Basic information

LNCipedia transcript ID: lnc-SMG6-1:1 
LNCipedia gene ID: lnc-SMG6-1
Location (hg38): chr17:2304462-2308048
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1625 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000514273
Alternative gene names: ENSG00000248963


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.4159 non-coding 
CPAT coding probability 3.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMG6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SMG6-1:1
3.1 lnc-SMG6-1:1
4.0 lnc-SMG6-1:1
4.1 lnc-SMG6-1:1
5.0 lnc-SMG6-1:1
5.1 lnc-RPH3AL-62:1
5.2 lnc-SMG6-1:1