Transcript: lnc-SMIM15-4:11

Basic information

LNCipedia transcript ID: lnc-SMIM15-4:11 
LNCipedia gene ID: lnc-SMIM15-4
Location (hg38): chr5:61660159-61663824
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1168 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003jss_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.0995 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMIM15-4:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf43-4:10
4.0 lnc-C5orf43-4:10
4.1 lnc-C5orf43-4:10
5.0 lnc-C5orf43-4:10
5.1 lnc-PLK2-15:11
5.2 lnc-SMIM15-4:11