Transcript: lnc-SMIM2-2:5

Basic information

LNCipedia transcript ID: lnc-SMIM2-2:5 
LNCipedia gene ID: lnc-SMIM2-2
Location (hg38): chr13:44234290-44234550
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 261 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr13_1831_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMIM2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C13orf44-2:3
4.0 lnc-C13orf44-2:3
4.1 lnc-C13orf44-2:3
5.0 lnc-C13orf44-2:3
5.1 lnc-CCDC169-96:5
5.2 lnc-SMIM2-2:5