Transcript: lnc-SMIM21-1:1

Basic information

LNCipedia transcript ID: lnc-SMIM21-1:1 
LNCipedia gene ID: lnc-SMIM21-1
Location (hg38): chr18:75433070-75455481
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 772 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT059896
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.6338 non-coding 
CPAT coding probability 4.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMIM21-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C18orf62-1:2
4.0 lnc-C18orf62-1:2
4.1 lnc-C18orf62-1:2
5.0 lnc-C18orf62-1:2
5.1 lnc-PQLC1-41:1
5.2 lnc-SMIM21-1:1