Transcript: lnc-SMNDC1-2:7

Basic information

LNCipedia transcript ID: lnc-SMNDC1-2:7 
LNCipedia gene ID: lnc-SMNDC1-2
Location (hg38): chr10:110469423-110497706
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 7483 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273143.1|ENCT00000060285.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.4547 non-coding 
CPAT coding probability 93.07% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMNDC1-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SMNDC1-2:7
5.0 lnc-SMNDC1-2:7
5.1 lnc-BBIP1-12:2
5.2 lnc-SMNDC1-2:7