Transcript: lnc-SMOC1-2:9

Basic information

LNCipedia transcript ID: lnc-SMOC1-2:9 
LNCipedia gene ID: lnc-SMOC1-2
Location (hg38): chr14:70187126-70233278
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6025 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258422.1|ENCT00000127367.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 55.0771 non-coding 
CPAT coding probability 98.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMOC1-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SMOC1-2:9
5.0 lnc-SMOC1-2:9
5.1 lnc-ACOT2-49:6
5.2 lnc-SMOC1-2:9