Transcript: lnc-SMPD3-2:2

Basic information

LNCipedia transcript ID: lnc-SMPD3-2:2 
LNCipedia gene ID: lnc-SMPD3-2
Location (hg38): chr16:68644950-68646142
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 954 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT143299
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -266.7992 non-coding 
CPAT coding probability 91.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SMPD3-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMPD3-2:2
4.0 lnc-SMPD3-2:2
4.1 lnc-SMPD3-2:2
5.0 lnc-SMPD3-2:2
5.1 lnc-SLC12A4-13:6
5.2 lnc-SMPD3-2:2